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Simbiome is a curated, online electronic resource that organizes and presents relevant resources for physics-based simulation of biomedical structures and related entities in biology and life sciences.
DelPhi
A Finite Difference Poisson-Boltzman Solver
http://wiki.c2b2.columbia.edu/honiglab_public/index.php/Software
| Software: Support Tool | |
DelPhi provides numerical solutions to the Poisson-Boltzmann equation (both linear and nonlinear form) for molecules of arbitrary shape and charge distribution. The current version is fast (the best relaxation parameter is estimated at run time), accurate (calculation of the electrostatic free energy is less dependent on the resolution of the lattice) and can handle extremely high lattice dimensions. It also includes flexible features for assigning different dielectric constants to different regions of space and treating systems containing mixed salt solutions. | |
| Development Stage | 5 - Production/Stable |
| Keywords | |
| Size Scale | 0 - N/A - not size specific |
| License | Other - not listed here |
| Resources with Similar Function | |
| Related Resources | Search Google |
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This work is licensed under a Creative Commons Attribution 2.5 License.