Login to your account
Create New Account

Simbiome is a curated, online electronic resource that organizes and presents relevant resources for physics-based simulation of biomedical structures and related entities in biology and life sciences.

Search Simbiome: Advanced

List all Resources

NAMD

University of Illinois

Parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems

http://www.ks.uiuc.edu/Research/namd/


Summary Assembled by Curation Team
Software: Simulation Application

NAMD, recipient of a 2002 Gordon Bell Award, is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. Based on Charm++ parallel objects, NAMD scales to hundreds of processors on high-end parallel platforms and tens of processors on commodity clusters using gigabit ethernet. NAMD uses the popular molecular graphics program VMD for simulation setup and trajectory analysis, but is also file-compatible with AMBER, CHARMM, and X-PLOR. NAMD is distributed free of charge with source code. You can build NAMD yourself or download binaries for a wide variety of platforms. Our tutorials show you how to use NAMD and VMD for biomolecular modeling.


Development Stage 4 - Development with public userbase
Keywords
License Other - not listed here
Resources with Similar Function
Related Resources TINKER   VMD   GROMACS   NAST   LAMMPS Molecular Dynamics Simulator   CHARMM   Amber - Molecular Dynamics   Amber Force Fields      Search Google
Last Updated on: May 27, 2008 Page hits 653, Clicks 484, Version 1 (1)

Suggest Update
Send the Curation Team a suggestion.

Arrow_stars

No ratings yet
 

     
  • Login to rate resource

Login to rate resource